IssueID #1487: split structure pipeline into two
This commit is contained in:
parent
6c78507e9d
commit
51ed244a5c
1
scripts/.gitignore
vendored
1
scripts/.gitignore
vendored
|
|
@ -1,3 +1,4 @@
|
|||
*.pyc
|
||||
/assign_structures.py
|
||||
/conllu_to_xml.py
|
||||
/wani.py
|
||||
|
|
|
|||
31
scripts/constants.py
Normal file
31
scripts/constants.py
Normal file
|
|
@ -0,0 +1,31 @@
|
|||
# temporary directory
|
||||
TMP_DIRECTORY = '../tmp/structure_assignment'
|
||||
|
||||
# scripts
|
||||
CONLLU_TEI_SCRIPT_NAME = 'conllu_to_xml.py'
|
||||
MWE_EXTRACTION_SCRIPT_NAME = 'wani.py'
|
||||
STRUCTURE_ASSIGNMENT_SCRIPT_NAME = 'assign_structures.py'
|
||||
STRUCTURE_CREATION_SCRIPT_NAME = 'create_structures.py'
|
||||
STRUCTURE_CREATION_SCRIPT_NAME = 'create_structures.py'
|
||||
TEI_DICTIONARY_SCRIPT_NAME = 'tei_to_dictionary.py'
|
||||
|
||||
# resources
|
||||
OBELIKS_JAR_FILE_NAME = '../resources/obeliks.jar'
|
||||
TRANSLATION_FILE_NAME = '../resources/dict.xml'
|
||||
CLASSLA_MODELS_DIRECTORY = '../resources/classla'
|
||||
STRUCTURE_CURRENT_FILE_NAME = '../resources/structures.xml'
|
||||
STRUCTURE_SCHEMA_FILE_NAME = '../resources/structures.xsd'
|
||||
DICTIONARY_SCHEMA_FILE_NAME = '../resources/monolingual_dictionaries.xsd'
|
||||
|
||||
# temporary outputs
|
||||
STRING_LIST_FILE_NAME = TMP_DIRECTORY + '/strings.txt'
|
||||
OBELIKS_RAW_FILE_NAME = TMP_DIRECTORY + '/obeliks_raw.conllu'
|
||||
OBELIKS_TWEAKED_FILE_NAME = TMP_DIRECTORY + '/obeliks_tweaked.conllu'
|
||||
CLASSLA_FILE_NAME = TMP_DIRECTORY + '/classla.conllu'
|
||||
TEI_INIT_FILE_NAME = TMP_DIRECTORY + '/tei_initial.xml'
|
||||
TEI_STRUCTURE_1_FILE_NAME = TMP_DIRECTORY + '/tei_with_structure_ids1.xml'
|
||||
TEI_STRUCTURE_2_FILE_NAME = TMP_DIRECTORY + '/tei_with_structure_ids2.xml'
|
||||
MWE_CSV_1_FILE_NAME = TMP_DIRECTORY + '/mwes1.csv'
|
||||
MWE_CSV_2_FILE_NAME = TMP_DIRECTORY + '/mwes2.csv'
|
||||
STRUCTURE_NEW_FILE_NAME = TMP_DIRECTORY + '/structures_new.xml'
|
||||
DICTIONARY_XML_FILE_NAME = TMP_DIRECTORY + '/dictionary.xml'
|
||||
|
|
@ -1,135 +0,0 @@
|
|||
import sys
|
||||
import os
|
||||
import shutil
|
||||
import codecs
|
||||
import re
|
||||
import lxml.etree as lxml
|
||||
|
||||
import classla
|
||||
from classla import Document
|
||||
from classla.models.common.conll import CoNLLFile
|
||||
|
||||
input_file_name = sys.argv[1]
|
||||
output_file_name = sys.argv[2]
|
||||
|
||||
TMP_DIRECTORY = '../tmp/structure_assignment'
|
||||
|
||||
CONLLU_TEI_SCRIPT_NAME = 'conllu_to_xml.py'
|
||||
MWE_EXTRACTION_SCRIPT_NAME = 'wani.py'
|
||||
STRUCTURE_ASSIGNMENT_SCRIPT_NAME = 'assign_structures.py'
|
||||
STRUCTURE_CREATION_SCRIPT_NAME = 'create_structures.py'
|
||||
STRUCTURE_CREATION_SCRIPT_NAME = 'create_structures.py'
|
||||
TEI_DICTIONARY_SCRIPT_NAME = 'tei_to_dictionary.py'
|
||||
|
||||
OBELIKS_JAR_FILE_NAME = '../resources/obeliks.jar'
|
||||
TRANSLATION_FILE_NAME = '../resources/dict.xml'
|
||||
CLASSLA_MODELS_DIRECTORY = '../resources/classla'
|
||||
STRUCTURE_CURRENT_FILE_NAME = '../resources/structures.xml'
|
||||
STRUCTURE_SCHEMA_FILE_NAME = '../resources/structures.xsd'
|
||||
DICTIONARY_SCHEMA_FILE_NAME = '../resources/monolingual_dictionaries.xsd'
|
||||
|
||||
STRING_LIST_FILE_NAME = TMP_DIRECTORY + '/strings.txt'
|
||||
OBELIKS_RAW_FILE_NAME = TMP_DIRECTORY + '/obeliks_raw.conllu'
|
||||
OBELIKS_TWEAKED_FILE_NAME = TMP_DIRECTORY + '/obeliks_tweaked.conllu'
|
||||
CLASSLA_FILE_NAME = TMP_DIRECTORY + '/classla.conllu'
|
||||
TEI_INIT_FILE_NAME = TMP_DIRECTORY + '/tei_initial.xml'
|
||||
TEI_STRUCTURE_1_FILE_NAME = TMP_DIRECTORY + '/tei_with_structure_ids1.xml'
|
||||
TEI_STRUCTURE_2_FILE_NAME = TMP_DIRECTORY + '/tei_with_structure_ids2.xml'
|
||||
MWE_CSV_1_FILE_NAME = TMP_DIRECTORY + '/mwes1.csv'
|
||||
MWE_CSV_2_FILE_NAME = TMP_DIRECTORY + '/mwes2.csv'
|
||||
STRUCTURE_NEW_FILE_NAME = TMP_DIRECTORY + '/structures_new.xml'
|
||||
DICTIONARY_XML_FILE_NAME = TMP_DIRECTORY + '/dictionary.xml'
|
||||
|
||||
NLP_CONFIG_MAP = {
|
||||
'treebank': 'sl_ssj_jos',
|
||||
'processors': 'tokenize,pos,lemma,depparse',
|
||||
'tokenize_pretokenized': True,
|
||||
'models_dir': CLASSLA_MODELS_DIRECTORY
|
||||
}
|
||||
|
||||
XML_ID_PREFIX = 's'
|
||||
|
||||
def run_pipeline(input_file_name, output_file_name):
|
||||
shutil.rmtree(TMP_DIRECTORY, True)
|
||||
os.makedirs(TMP_DIRECTORY, exist_ok=True)
|
||||
shutil.copyfile(input_file_name, STRING_LIST_FILE_NAME)
|
||||
run_obeliks4J(STRING_LIST_FILE_NAME, OBELIKS_RAW_FILE_NAME)
|
||||
fix_xml_ids(OBELIKS_RAW_FILE_NAME, OBELIKS_TWEAKED_FILE_NAME)
|
||||
run_classla(OBELIKS_TWEAKED_FILE_NAME, CLASSLA_FILE_NAME)
|
||||
run_tei_conversion(CLASSLA_FILE_NAME, TEI_INIT_FILE_NAME)
|
||||
run_mwe_extraction(STRUCTURE_CURRENT_FILE_NAME, TEI_INIT_FILE_NAME, MWE_CSV_1_FILE_NAME)
|
||||
run_structure_assignment(STRING_LIST_FILE_NAME, TEI_INIT_FILE_NAME, MWE_CSV_1_FILE_NAME, TEI_STRUCTURE_1_FILE_NAME)
|
||||
run_structure_creation(STRUCTURE_CURRENT_FILE_NAME, TEI_STRUCTURE_1_FILE_NAME, STRUCTURE_NEW_FILE_NAME)
|
||||
validate_structures(STRUCTURE_NEW_FILE_NAME)
|
||||
run_mwe_extraction(STRUCTURE_NEW_FILE_NAME, TEI_INIT_FILE_NAME, MWE_CSV_2_FILE_NAME)
|
||||
run_structure_assignment(STRING_LIST_FILE_NAME, TEI_INIT_FILE_NAME, MWE_CSV_2_FILE_NAME, TEI_STRUCTURE_2_FILE_NAME)
|
||||
run_dictionary_conversion(TEI_STRUCTURE_2_FILE_NAME, DICTIONARY_XML_FILE_NAME)
|
||||
validate_dictionary(DICTIONARY_XML_FILE_NAME)
|
||||
shutil.copyfile(DICTIONARY_XML_FILE_NAME, output_file_name)
|
||||
|
||||
def run_obeliks4J(obeliks_file_name, classla_file_name):
|
||||
print('Running obeliks ...')
|
||||
obeliks_command = 'java -jar ' + OBELIKS_JAR_FILE_NAME + ' -d -if ' + STRING_LIST_FILE_NAME + ' -o ' + OBELIKS_RAW_FILE_NAME
|
||||
os.system(obeliks_command)
|
||||
|
||||
def fix_xml_ids(input_file_name, output_file_name):
|
||||
print('Fixing xml ids ...')
|
||||
output_file = codecs.open(output_file_name, 'w')
|
||||
input_file = codecs.open(input_file_name, 'r')
|
||||
regexp = r'^(# sent_id = )(\d+\.\d+)$'
|
||||
for line in input_file:
|
||||
match = re.search(regexp, line)
|
||||
if (match):
|
||||
line = match.group(1) + XML_ID_PREFIX + match.group(2) + '\n'
|
||||
output_file.write(line)
|
||||
input_file.close()
|
||||
output_file.close()
|
||||
|
||||
def run_classla(obeliks_file_name, classla_file_name):
|
||||
print('Running classla ...')
|
||||
doc = Document(text=None)
|
||||
conll_file = CoNLLFile(filename=obeliks_file_name)
|
||||
doc.conll_file = conll_file
|
||||
nlp = classla.Pipeline('sl', **NLP_CONFIG_MAP)
|
||||
result = nlp(doc)
|
||||
result.conll_file.write_conll(classla_file_name)
|
||||
|
||||
def run_tei_conversion(classla_file_name, tei_file_name):
|
||||
print('Converting to tei ...')
|
||||
convert_command = ' '.join(['python', CONLLU_TEI_SCRIPT_NAME, classla_file_name, tei_file_name, '--translate', TRANSLATION_FILE_NAME])
|
||||
os.system(convert_command)
|
||||
|
||||
def run_mwe_extraction(structure_file_name, tei_file_name, mwe_csv_file_name):
|
||||
print('Extracting MWEs from tei ...')
|
||||
extraction_command = ' '.join(['python', MWE_EXTRACTION_SCRIPT_NAME, structure_file_name, tei_file_name, '--all', mwe_csv_file_name, '--skip-id-check', '--fixed-restriction-order'])
|
||||
print(extraction_command)
|
||||
os.system(extraction_command)
|
||||
|
||||
def validate_structures(structure_file_name):
|
||||
print('Validating updated structure specifications ...')
|
||||
xml_schema = lxml.XMLSchema(lxml.parse(STRUCTURE_SCHEMA_FILE_NAME))
|
||||
xml_tree = lxml.parse(structure_file_name)
|
||||
xml_schema.assertValid(xml_tree)
|
||||
|
||||
def run_structure_assignment(input_file_name, tei_file_name, mwe_csv_file_name, output_file_name):
|
||||
print('Assigning structure ids ...')
|
||||
assignment_command = ' '.join(['python', STRUCTURE_ASSIGNMENT_SCRIPT_NAME, input_file_name, tei_file_name, mwe_csv_file_name, output_file_name])
|
||||
os.system(assignment_command)
|
||||
|
||||
def run_structure_creation(input_file_name, tei_file_name, output_file_name):
|
||||
print('Creating missing structures ...')
|
||||
creation_command = ' '.join(['python', STRUCTURE_CREATION_SCRIPT_NAME, '-infile', input_file_name, '-tei', tei_file_name, '-outfile', output_file_name])
|
||||
os.system(creation_command)
|
||||
|
||||
def run_dictionary_conversion(tei_file_name, xml_file_name):
|
||||
print('Converting to dictionary xml format ...')
|
||||
convert_command = ' '.join(['python', TEI_DICTIONARY_SCRIPT_NAME, '-infile', tei_file_name, '-outfile', xml_file_name])
|
||||
os.system(convert_command)
|
||||
|
||||
def validate_dictionary(dictionary_file_name):
|
||||
print('Validating output dictionary file ...')
|
||||
xml_schema = lxml.XMLSchema(lxml.parse(DICTIONARY_SCHEMA_FILE_NAME))
|
||||
xml_tree = lxml.parse(dictionary_file_name)
|
||||
xml_schema.assertValid(xml_tree)
|
||||
|
||||
run_pipeline(input_file_name, output_file_name)
|
||||
71
scripts/pipeline1.py
Normal file
71
scripts/pipeline1.py
Normal file
|
|
@ -0,0 +1,71 @@
|
|||
import argparse
|
||||
import os
|
||||
import shutil
|
||||
import codecs
|
||||
import re
|
||||
|
||||
import classla
|
||||
from classla import Document
|
||||
from classla.models.common.conll import CoNLLFile
|
||||
|
||||
from constants import *
|
||||
|
||||
arg_parser = argparse.ArgumentParser(description='Parse Slovene strings and convert to TEI.')
|
||||
arg_parser.add_argument('-inlist', type=str, help='Input list file')
|
||||
arg_parser.add_argument('-outtei', type=str, help='Output TEI file')
|
||||
arguments = arg_parser.parse_args()
|
||||
input_file_name = arguments.infile
|
||||
output_file_name = arguments.outfile
|
||||
|
||||
NLP_CONFIG_MAP = {
|
||||
'treebank': 'sl_ssj_jos',
|
||||
'processors': 'tokenize,pos,lemma,depparse',
|
||||
'tokenize_pretokenized': True,
|
||||
'models_dir': CLASSLA_MODELS_DIRECTORY
|
||||
}
|
||||
|
||||
XML_ID_PREFIX = 's'
|
||||
|
||||
def run_pipeline(input_file_name, output_file_name):
|
||||
shutil.rmtree(TMP_DIRECTORY, True)
|
||||
os.makedirs(TMP_DIRECTORY, exist_ok=True)
|
||||
shutil.copyfile(input_file_name, STRING_LIST_FILE_NAME)
|
||||
run_obeliks4J(STRING_LIST_FILE_NAME, OBELIKS_RAW_FILE_NAME)
|
||||
fix_xml_ids(OBELIKS_RAW_FILE_NAME, OBELIKS_TWEAKED_FILE_NAME)
|
||||
run_classla(OBELIKS_TWEAKED_FILE_NAME, CLASSLA_FILE_NAME)
|
||||
run_tei_conversion(CLASSLA_FILE_NAME, TEI_INIT_FILE_NAME)
|
||||
shutil.copyfile(TEI_INIT_FILE_NAME, output_file_name)
|
||||
|
||||
def run_obeliks4J(obeliks_file_name, classla_file_name):
|
||||
print('Running obeliks ...')
|
||||
obeliks_command = 'java -jar ' + OBELIKS_JAR_FILE_NAME + ' -d -if ' + STRING_LIST_FILE_NAME + ' -o ' + OBELIKS_RAW_FILE_NAME
|
||||
os.system(obeliks_command)
|
||||
|
||||
def fix_xml_ids(input_file_name, output_file_name):
|
||||
print('Fixing xml ids ...')
|
||||
output_file = codecs.open(output_file_name, 'w')
|
||||
input_file = codecs.open(input_file_name, 'r')
|
||||
regexp = r'^(# sent_id = )(\d+\.\d+)$'
|
||||
for line in input_file:
|
||||
match = re.search(regexp, line)
|
||||
if (match):
|
||||
line = match.group(1) + XML_ID_PREFIX + match.group(2) + '\n'
|
||||
output_file.write(line)
|
||||
input_file.close()
|
||||
output_file.close()
|
||||
|
||||
def run_classla(obeliks_file_name, classla_file_name):
|
||||
print('Running classla ...')
|
||||
doc = Document(text=None)
|
||||
conll_file = CoNLLFile(filename=obeliks_file_name)
|
||||
doc.conll_file = conll_file
|
||||
nlp = classla.Pipeline('sl', **NLP_CONFIG_MAP)
|
||||
result = nlp(doc)
|
||||
result.conll_file.write_conll(classla_file_name)
|
||||
|
||||
def run_tei_conversion(classla_file_name, tei_file_name):
|
||||
print('Converting to tei ...')
|
||||
convert_command = ' '.join(['python', CONLLU_TEI_SCRIPT_NAME, classla_file_name, tei_file_name, '--translate', TRANSLATION_FILE_NAME])
|
||||
os.system(convert_command)
|
||||
|
||||
run_pipeline(input_file_name, output_file_name)
|
||||
68
scripts/pipeline2.py
Normal file
68
scripts/pipeline2.py
Normal file
|
|
@ -0,0 +1,68 @@
|
|||
import argparse
|
||||
import os
|
||||
import shutil
|
||||
import lxml.etree as lxml
|
||||
|
||||
from constants import *
|
||||
|
||||
arg_parser = argparse.ArgumentParser(description='Assign parsed Slovene strings to structures and generate lexicon.')
|
||||
arg_parser.add_argument('-inlist', type=str, help='Original input list file')
|
||||
arg_parser.add_argument('-intei', type=str, help='Parsed and manually edited TEI file')
|
||||
arg_parser.add_argument('-outstructures', type=str, help='Output structure file')
|
||||
arg_parser.add_argument('-outlexicon', type=str, help='Output lexicon file')
|
||||
arguments = arg_parser.parse_args()
|
||||
input_list_file_name = arguments.inlist
|
||||
input_tei_file_name = arguments.intei
|
||||
output_lexicon_file_name = arguments.outlexicon
|
||||
output_structure_file_name = arguments.outstructures
|
||||
|
||||
def run_pipeline(input_list_file_name, input_tei_file_name, output_lexicon_file_name, output_structure_file_name):
|
||||
shutil.rmtree(TMP_DIRECTORY, True)
|
||||
os.makedirs(TMP_DIRECTORY, exist_ok=True)
|
||||
shutil.copyfile(input_list_file_name, STRING_LIST_FILE_NAME)
|
||||
shutil.copyfile(input_tei_file_name, TEI_INIT_FILE_NAME)
|
||||
run_mwe_extraction(STRUCTURE_CURRENT_FILE_NAME, TEI_INIT_FILE_NAME, MWE_CSV_1_FILE_NAME)
|
||||
run_structure_assignment(STRING_LIST_FILE_NAME, TEI_INIT_FILE_NAME, MWE_CSV_1_FILE_NAME, TEI_STRUCTURE_1_FILE_NAME)
|
||||
run_structure_creation(STRUCTURE_CURRENT_FILE_NAME, TEI_STRUCTURE_1_FILE_NAME, STRUCTURE_NEW_FILE_NAME)
|
||||
validate_structures(STRUCTURE_NEW_FILE_NAME)
|
||||
run_mwe_extraction(STRUCTURE_NEW_FILE_NAME, TEI_INIT_FILE_NAME, MWE_CSV_2_FILE_NAME)
|
||||
run_structure_assignment(STRING_LIST_FILE_NAME, TEI_INIT_FILE_NAME, MWE_CSV_2_FILE_NAME, TEI_STRUCTURE_2_FILE_NAME)
|
||||
run_dictionary_conversion(TEI_STRUCTURE_2_FILE_NAME, DICTIONARY_XML_FILE_NAME)
|
||||
validate_dictionary(DICTIONARY_XML_FILE_NAME)
|
||||
shutil.copyfile(DICTIONARY_XML_FILE_NAME, output_lexicon_file_name)
|
||||
shutil.copyfile(STRUCTURE_NEW_FILE_NAME, output_structure_file_name)
|
||||
|
||||
def run_mwe_extraction(structure_file_name, tei_file_name, mwe_csv_file_name):
|
||||
print('Extracting MWEs from tei ...')
|
||||
extraction_command = ' '.join(['python', MWE_EXTRACTION_SCRIPT_NAME, structure_file_name, tei_file_name, '--all', mwe_csv_file_name, '--skip-id-check', '--fixed-restriction-order'])
|
||||
print(extraction_command)
|
||||
os.system(extraction_command)
|
||||
|
||||
def validate_structures(structure_file_name):
|
||||
print('Validating updated structure specifications ...')
|
||||
xml_schema = lxml.XMLSchema(lxml.parse(STRUCTURE_SCHEMA_FILE_NAME))
|
||||
xml_tree = lxml.parse(structure_file_name)
|
||||
xml_schema.assertValid(xml_tree)
|
||||
|
||||
def run_structure_assignment(input_file_name, tei_file_name, mwe_csv_file_name, output_file_name):
|
||||
print('Assigning structure ids ...')
|
||||
assignment_command = ' '.join(['python', STRUCTURE_ASSIGNMENT_SCRIPT_NAME, input_file_name, tei_file_name, mwe_csv_file_name, output_file_name])
|
||||
os.system(assignment_command)
|
||||
|
||||
def run_structure_creation(input_file_name, tei_file_name, output_file_name):
|
||||
print('Creating missing structures ...')
|
||||
creation_command = ' '.join(['python', STRUCTURE_CREATION_SCRIPT_NAME, '-infile', input_file_name, '-tei', tei_file_name, '-outfile', output_file_name])
|
||||
os.system(creation_command)
|
||||
|
||||
def run_dictionary_conversion(tei_file_name, xml_file_name):
|
||||
print('Converting to dictionary xml format ...')
|
||||
convert_command = ' '.join(['python', TEI_DICTIONARY_SCRIPT_NAME, '-infile', tei_file_name, '-outfile', xml_file_name])
|
||||
os.system(convert_command)
|
||||
|
||||
def validate_dictionary(dictionary_file_name):
|
||||
print('Validating output dictionary file ...')
|
||||
xml_schema = lxml.XMLSchema(lxml.parse(DICTIONARY_SCHEMA_FILE_NAME))
|
||||
xml_tree = lxml.parse(dictionary_file_name)
|
||||
xml_schema.assertValid(xml_tree)
|
||||
|
||||
run_pipeline(input_list_file_name, input_tei_file_name, output_lexicon_file_name, output_structure_file_name)
|
||||
Loading…
Reference in New Issue
Block a user